Limitations

Limitations LY317615 of the study Undoubtedly the sample size in the present study was limited. However, given the fact that human tissue is notoriously hard Inhibitors,Modulators,Libraries to obtain in exercise studies, major efforts were utilized to maximize the power of the study by minimizing the potential for experimental error. The technical error inherent in high density oligo nucleotide technology such as the Affymetrix platform is fairly low. However, the biological variability is large and has been identified as a major source of experimental error leading to a need for large sample sizes in conducting microarray studies. This is espe cially true in studies Inhibitors,Modulators,Libraries involving human tissue because there is substantial polymorphic noise due to the outbred nature of the human population.

Neverthe less, it has been demonstrated that reducing biological variability is an efficient and viable solution for achiev ing reliable Drug_discovery results with a limited number of samples. In the present study, much effort has been paid to reduce the potential influence of inter individual varia bility on gene expression, as mentioned at the beginning of the Discussion section. Furthermore, the analytic methods we used, i. e. LRpath combined with an intensity based Bayesian moderated t statistic, can maximize the detection power while accurately estimating the false discovery rate, and have also demonstrated superior performance with small sample sizes. Consequently, by using a stringent study design and powerful analytical tools, we estimate that we were able to detect a 1. 5 fold change at the 0. 01 alpha level for 90% of the probes with at least 91% power.

Inhibitors,Modulators,Libraries For the mid to high expressed genes, the power was even greater due to their lower variance. As such, we believe that the findings from the present study are valid and reliable for three principal reasons, 1 Our results are generally consistent with those reported pre viously, 2 We studied different individuals at two time points and the major RE altered biological processes and molecular pathways independently identified were similar across both time points in males, 3 Although we focused on the sex based differences in gene regulation in this study, it is noteworthy that many of the main biological themes reflected by female and male muscles were similar as expected. The consistent find ings within the present study provide additional evi dence that our results are reliable.

We also recognize that the changes Inhibitors,Modulators,Libraries in protein levels do not always follow transcriptional regulations. new product Post transcriptional modification and protein interactions need to be considered in order to fully understand the contribution of these transcriptional findings in future studies. Conclusions In conclusion, our novel data indicate that sex plays an important role in the time course of skeletal muscle transcriptional regulation in response to resistance exer cise.

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